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!!!A guide to accessing and analyzing EIS data
[{ALLOW edit EISMainUsers}]
[{ALLOW view Anonymous}]
%%(color:red;)__This page is still under construction. All of the information should be accurate, but some of the links are broken.__%%
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This guide describes how to access, calibrate and derive scientific results from the EIS instrument on Hinode. For a description of EIS and its observing modes please consult the instrument paper, [Culhane et al. (2007)|http://adsabs.harvard.edu/abs/2007SoPh..243...19C], and the [MSSL Science Centre webpage|http://msslxr.mssl.ucl.ac.uk:8080/SolarB/].
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!!!EIS data analysis guide
This guide describes how to access, calibrate and derive scientific results from the EIS instrument on Hinode. For a description of EIS and its observing modes please consult the instrument paper, [Culhane et al. (2007)|http://adsabs.harvard.edu/abs/2007SoPh..243...19C], and the [MSSL Science Centre webpage|https://vsolar.mssl.ucl.ac.uk/SolarB/].
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[MSSL Science Centre (UK)|http://msslxr.mssl.ucl.ac.uk:8080/SolarB/]\\
[MSSL Science Centre (UK)|https://vsolar.mssl.ucl.ac.uk/SolarB/]\\
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The 1" and 2" slits return emission line spectra and a basic task for such data-sets is to fit Gaussians to the emission lines to return intensity, centroid and width information. Gaussian fitting routines available to EIS users are described below. Interpretation of centroids and widths is hampered by certain instrumental effects and these are dealt with in the sections below.
The 1" and 2" slits return emission line spectra and a basic task for such data-sets is to fit Gaussians to the emission lines to return intensity, centroid and width information. Gaussian fitting routines available to EIS users are described below. The routines correct for most instrumental effects, but users should familiarize themselves with some of these effects through the software notes listed below:
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* Warm and hot pixels (Software Notes 6 and 13)
* Orbital drift of line centroids (Software Note 5)
* EIS slit tilts (Software Note 4)
* EIS grating tilt (Software Note 3)
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!Intensity maps
Fitting a Gaussian function to an emission line yields measures of the line intensity, centroid (velocity) and width. Single Gaussian fits to individual lines are possible using [EIS object methods|EISmethods], while more sophisticated fitting options are available through the EIS_AUTO_FIT and SPEC_GAUSS_EIS routines available in Solarsoft. Documents describing these routines and giving examples are listed below.
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!Velocity maps
[Gaussian fitting for the Hinode/EIS mission|https://hyperion.nascom.nasa.gov/svn/eis/release/doc/fitting/eis_auto_fit.pdf]\\
[Gaussian fitting examples using eis_auto_fit|https://hyperion.nascom.nasa.gov/svn/eis/release/doc/fitting/eis_auto_fit_examples.pdf]
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!Line width maps
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Users should be aware that EIS line profiles can often take on non-Gaussian shapes which may contain valuable scientific information (e.g., [Chifor et al. 2008|http://adsabs.harvard.edu/abs/2008A%26A...481L..57C,], [De Pontieu et al. 2009|http://adsabs.harvard.edu/abs/2009ApJ...701L...1D,]).
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!!Slot data (40", 266" slits)
Some emission line ratios are sensitive to the electron density, and software is available to take the line fit structures output by EIS_AUTO_FIT and convert them to electron density maps. The density then allows the emitting column depth of the plasma to be determined which in turn allows the filling factor of the plasma to be estimated. The document below describes how this done, making use of atomic data from the [CHIANTI database|http://www.chiantidatabase.org].
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The EIS slots produce images rather than spectra, and the most common application will be to produce movies from the slot rasters in a range of emission lines. Diagnostics are possible with the slots, however, by taking ratios of images and temperature and density diagnostics are described below.
Deriving densities from Hinode/EIS data
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!Making movies
!Emission measure
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!Temperature diagnostics
When line intensities are available from several different ions, then an emission measure (EM) or differential emission measure (DEM) distribution can be constructed. No specific EIS software is available for doing this and so users are referred to software in the CHIANTI database, in particular:
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!Density diagnostics
integral_calc.pro: computes an EM value from a single line intensity\\
chianti_dem.pro: computes a DEM distribution from multiple line intensities
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!!Pointing and co-alignment
Another popular DEM code is available within the [PINTofALE|http://hea-www.harvard.edu/PINTofALE/] software package.
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Most EIS users will be analyzing data-sets from multiple instruments and so it is necessary to determine where an EIS raster is positioned relative to the other instruments. Usually the pointing information within an EIS file will not be good enough to accurately co-align data-sets and so cross-correlation will be necessary.
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!How to get the most accurate EIS coordinates
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!EIS and IDL maps
!!Slot data (40", 266" slits)
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The set of [IDL map software|http://beauty.nascom.nasa.gov/~zarro/idl/maps/maps.html] of D. Zarro is a popular means for handling solar image data. The situation is more complicated for EIS than imaging instruments as an image can be an intensity, velocity or line width map. EIS maps are generated from EIS data objects as follows (in the case of a velocity map from Fe XII 195.12):
The EIS slots produce images rather than spectra, and the most common application will be to produce movies from the slot rasters in a range of emission lines. Diagnostics are possible with the slots, however, by taking ratios of images and temperature and density diagnostics are described below.
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IDL> obj=obj_new('eis_data', filename)\\
IDL> m=obj_new('eis_moment',obj,iwin=195.12)\\
IDL> mmap=m->mk_eis_map(195.12,/vel)
!Making movies
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The output mmap is in the standard format accepted by the map software.
!Temperature diagnostics
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To generate an intensity map use keyword /int and for a line width map use /wid. When the 'eis_moment' object is created (step 2) a widget will pop up allowing you to define the spectral region containing the emission line. Moments are used to generate the velocity and line widths which ensures quick results. You can use Gaussian fitting by giving the additional keyword fit='gauss' in step 2 for the eis_moment call.
!Density diagnostics
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!Cross-correlation with SOT and XRT
!!Pointing and co-alignment
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!Cross-correlation with EIT and TRACE
Most EIS users will be analyzing data-sets from multiple instruments and so it is necessary to determine where an EIS raster is positioned relative to the other instruments. Usually the pointing information within an EIS file will not be good enough to accurately co-align data-sets and so cross-correlation will be necessary.
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* [Obtaining pointing information from EIS data|EISPointing]
* [Creating an IDL map from EIS data|EISMaps]
* [Cross-correlating EIS and SOT images|EISSOTcoalign]
* [Cross-correlating EIS and XRT images|EISXRTcoaling]